# Copyright 1999-2022 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 # @ECLASS: emboss-r3.eclass # @MAINTAINER: # sci-biology@gentoo.org # @AUTHOR: # Original author: Author Olivier Fisette # Next gen author: Justin Lecher # Next gen author: Ted Tanberry # @SUPPORTED_EAPIS: 8 # @BLURB: Use this to easy install EMBOSS and EMBASSY programs (EMBOSS add-ons). # @DESCRIPTION: # The inheriting ebuild must provide EBO_DESCRIPTION before the inherit line. # # Example: # # EAPI=8 # # EBO_DESCRIPTION="applications from the CBS group" # # inherit emboss-r3 # @ECLASS_VARIABLE: EBO_DESCRIPTION # @PRE_INHERIT # @DEFAULT_UNSET # @DESCRIPTION: # Completes the generic description of the embassy module as follows: # # EMBOSS integrated version of ${EBO_DESCRIPTION}, e.g. # # "EMBOSS integrated version of applications from the CBS group" # # Defaults to the upstream name of the module. case ${EAPI} in 8) ;; *) die "${ECLASS}: EAPI ${EAPI:-0} not supported" ;; esac if [[ ! ${_EMBOSS_R3_ECLASS} ]]; then _EMBOSS_R3_ECLASS=1 inherit flag-o-matic HOMEPAGE="http://emboss.sourceforge.net/" LICENSE="LGPL-2 GPL-2" SLOT="0" IUSE="mysql pdf png postgres X" RDEPEND=" dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt )" if [[ ${PN} == embassy-* ]]; then EMBASSY_PACKAGE=yes # The EMBASSY package name, retrieved from the inheriting ebuild's name EN=${PN:8} # The full name and version of the EMBASSY package (excluding the Gentoo # revision number) EF="${EN^^}-${PV}" [[ ${EBO_DESCRIPTION} ]] || die "EBO_DESCRIPTION was not set before inheriting emboss-r3.eclass" DESCRIPTION="EMBOSS integrated version of ${EBO_DESCRIPTION}" SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/${EF}.tar.gz -> embassy-${EN}-${PV}.tar.gz" RDEPEND+=" >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]" S="${WORKDIR}/${EF}" fi DEPEND="${RDEPEND}" # @FUNCTION: emboss-r3_src_configure # @DESCRIPTION: # runs econf with following options. # # --enable-shared # $(use_with X x) # $(use_with png pngdriver) # $(use_with pdf hpdf) # $(use_with mysql mysql) # $(use_with postgres postgresql) # --enable-large # --without-java # --enable-systemlibs # # can be appended to like econf, e.g. # emboss-r3_src_configure --enable-foo emboss-r3_src_configure() { local myconf=( --enable-shared $(use_with X x) $(use_with png pngdriver "${ESYSROOT}"/usr) $(use_with pdf hpdf "${ESYSROOT}"/usr) $(use_with mysql mysql "${EPREFIX}"/usr/bin/mysql_config) $(use_with postgres postgresql "${EPREFIX}"/usr/bin/pg_config) --enable-large --without-java --enable-systemlibs ) [[ ${EMBASSY_PACKAGE} == yes ]] && append-cppflags "-I${ESYSROOT}/usr/include/emboss" econf "${myconf[@]}" "$@" } # @FUNCTION: emboss-r3_src_install # @DESCRIPTION: # Installs the package into the staging area and removes unnecessary .la files. emboss-r3_src_install() { default # delete .la files find "${ED}" -name '*.la' -delete || die } fi EXPORT_FUNCTIONS src_configure src_install