python-cogent (1.5-1) unstable; urgency=low

  * Bumped standard to 3.9.1, no changes required.
  * New upstream version.
    - major additions to Cookbook
    - added AlleleFreqs attribute to ensembl Variation objects.
    - added getGeneByStableId method to genome objects.
    - added Introns attribute to Transcript objects and an Intron class.
    - added Mann-Whitney test and a Monte-Carlo version
    - exploratory and confirmatory period estimation techniques (suitable for
      symbolic and continuous data)
    - Information theoretic measures (AIC and BIC) added
    - drawing of trees with collapsed nodes
    - progress display indicator support for terminal and GUI apps
    - added parser for illumina HiSeq2000 and GAiix sequence files as 
      cogent.parse.illumina_sequence.MinimalIlluminaSequenceParser.
    - added parser to FASTQ files, one of the output options for illumina's
      workflow, also added cookbook demo.
    - added functionality for parsing of SFF files without the Roche tools in
      cogent.parse.binary_sff
    - thousand fold performance improvement to nmds
    - >10-fold performance improvements to some Table operations

 -- Steffen Moeller <moeller@debian.org>  Sat, 04 Dec 2010 22:30:35 +0100

python-cogent (1.4.1-1.2) unstable; urgency=low

  * Non-maintainer upload.
  * Mark package as auto-buildable

 -- Moritz Muehlenhoff <jmm@debian.org>  Wed, 13 Oct 2010 20:56:27 +0200

python-cogent (1.4.1-1.1) unstable; urgency=low

  * Non-maintainer upload.
  * Replace build-dependency on python2.5-dev with python-all-dev. Closes: #596325.

 -- Matthias Klose <doko@debian.org>  Sun, 12 Sep 2010 15:18:44 +0200

python-cogent (1.4.1-1) unstable; urgency=low

  * Initial release (Closes: #587161)

 -- Sri Girish Srinivasa Murthy <srigirish@evolbio.mpg.de>  Sat, 24 Jul 2010 00:53:31 +0200

