Opossum (Monodelphis domestica, BROADO5) and Wallaby(Macropus eugenii, Meug_1.0) were aligned using the BlastZ alignment algorithm (Schwartz S et al., Genome Res.;13(1):103-7, Kent WJ et al., Proc Natl Acad Sci U S A., 2003;100(20):11484-9) in Ensembl release 57. Opossum was used as the reference species. After running BlastZ, the raw BlastZ alignment blocks are chained according to their location in both genomes. During the final netting process, the best sub-chain is chosen in each region on the reference species.
Full list of pairwise alignmentsNumber of alignment blocks: 2212804
Genome coverage(bp) | Coding exon coverage (bp) | |
---|---|---|
Opossum | ![]() |
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1,364,730,215 out of 3,605,631,728 | 27,762,522 out of 31,790,129 | |
Wallaby | ![]() |
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1,287,999,745 out of 2,955,773,937 | 20,334,999 out of 25,589,509 |